Metalloproteinase-dependent and TMPRSS2-independnt cell surface entry pathway of SARS-CoV-2 requires the furin-cleavage site and the S2 domain of spike protein

Metalloproteinase-dependent and TMPRSS2-independnt cell surface entry pathway of SARS-CoV-2 requires the furin-cleavage site and the S2 domain of spike protein
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SARS-CoV-2 的金属蛋白酶依赖性和 TMPRSS2 独立性细胞表面进入途径需要弗林蛋白酶切割位点和刺突蛋白的 S2 结构域

DOI:
10.1101/2021.12.14.472513
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发表时间:
2021
期刊:
BioRxiv
影响因子:
--
通讯作者:
Inoue Jun-ichiro
Inoue Jun-ichiro
中科院分区:
--
文献类型:
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作者:
Yamamoto Mizuki;Gohda Jin;Kobayashi Ayako;Tomita Keiko;Hirayama Youko;Koshikawa Naohiko;Seiki Motoharu;Semba Kentaro;Akiyama Tetsu;Kawaguchi Yasushi;Inoue Jun-ichiro

文献摘要

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正在进行的预防 SARS-CoV-2(COVID-19 病原体)感染的全球疫苗接种计划已取得重大成功。然而,最近出现了可以逃避通过疫苗接种获得的宿主免疫力的病毒变种。因此,迫切需要能够有效预防这些新变种感染并进而预防 COVID-19 传播的新治疗药物。为了实现这一目标,需要对病毒-宿主细胞相互作用进行广泛表征,以确定有效的治疗靶点。在这里,我们报道了 SARS-CoV-2 的细胞表面进入途径,该途径以细胞类型依赖性方式存在,并且不依赖于 TMPRSS2,但对各种广谱金属蛋白酶抑制剂(例如 marimastat 和 primastat)敏感。使用选择性金属蛋白酶抑制剂和基因特异性小干扰 RNA (siRNA) 的实验表明,解整合素和金属蛋白酶 10 (ADAM10) 部分参与金属蛋白酶途径。与我们的发现一致,即该途径是高致病性人类冠状病毒中 SARS-CoV-2 所独有的,S1/S2 边界中的弗林蛋白酶切割基序和 SARS-CoV-2 刺突蛋白的 S2 结构域对于金属蛋白酶依赖性进入至关重要。相比之下,SARS-CoV-2 的两个元件独立地促成 TMPRSS2 依赖性 S2 启动。金属蛋白酶途径参与 SARS-CoV-2 诱导的合胞体形成和细胞病变,因此我们推测它也参与 SARS-CoV-2 的快速传播和 COVID-19 的发病机制。因此,除了 TMPRSS2 和内体途径之外,针对金属蛋白酶途径可能是未来治愈 COVID-19 的有效策略。 重要性 为了开发针对 COVID-19 的有效疗法,有必要详细阐明病原体 SARS-CoV-2 的感染机制。 SARS-CoV-2 通过刺突蛋白与细胞表面受体 ACE2 结合,然后刺突蛋白被宿主蛋白酶切割以使其能够进入。在这里,我们发现除了 TMPRSS2 介导的途径和内体途径外,金属蛋白酶介导的途径对于 SARS-CoV-2 感染也很重要。金属蛋白酶介导的途径需要事先将刺突裂解成两个结构域,并且需要第二个结构域 S2 中的特定序列,这是 SARS-CoV-2 满足的条件,但在相关的人类冠状病毒 SARS-CoV 中缺乏。除了金属蛋白酶对 SARS-CoV-2 感染的贡献之外,抑制金属蛋白酶对于防止细胞死亡也很重要,细胞死亡可能会导致器官损伤。我们的研究为 COVID-19 独特的复杂发病机制提供了新的见解,并与有效疗法的开发相关。
The ongoing global vaccination program to prevent SARS-CoV-2 infection, the causative agent of COVID-19, has had significant success. However, recently, virus variants that can evade the immunity in a host achieved through vaccination have emerged. Consequently, new therapeutic agents that can efficiently prevent infection from these new variants, and hence COVID-19 spread, are urgently required. To achieve this, extensive characterization of virus-host cell interactions to identify effective therapeutic targets is warranted. Here, we report a cell surface entry pathway of SARS-CoV-2 that exists in a cell type-dependent manner and is TMPRSS2 independent but sensitive to various broad-spectrum metalloproteinase inhibitors such as marimastat and prinomastat. Experiments with selective metalloproteinase inhibitors and gene-specific small interfering RNAS (siRNAs) revealed that a disintegrin and metalloproteinase 10 (ADAM10) is partially involved in the metalloproteinase pathway. Consistent with our finding that the pathway is unique to SARS-CoV-2 among highly pathogenic human coronaviruses, both the furin cleavage motif in the S1/S2 boundary and the S2 domain of SARS-CoV-2 spike protein are essential for metalloproteinase-dependent entry. In contrast, the two elements of SARS-CoV-2 independently contributed to TMPRSS2-dependent S2 priming. The metalloproteinase pathway is involved in SARS-CoV-2-induced syncytium formation and cytopathicity, leading us to theorize that it is also involved in the rapid spread of SARS-CoV-2 and the pathogenesis of COVID-19. Thus, targeting the metalloproteinase pathway in addition to the TMPRSS2 and endosomal pathways could be an effective strategy by which to cure COVID-19 in the future.IMPORTANCETo develop effective therapeutics against COVID-19, it is necessary to elucidate in detail the infection mechanism of the causative agent, SARS-CoV-2. SARS-CoV-2 binds to the cell surface receptor ACE2 via the spike protein, and then the spike protein is cleaved by host proteases to enable entry. Here, we found that the metalloproteinase-mediated pathway is important for SARS-CoV-2 infection in addition to the TMPRSS2-mediated pathway and the endosomal pathway. The metalloproteinase-mediated pathway requires both the prior cleavage of spike into two domains and a specific sequence in the second domain, S2, conditions met by SARS-CoV-2 but lacking in the related human coronavirus SARS-CoV. Besides the contribution of metalloproteinases to SARS-CoV-2 infection, inhibition of metalloproteinases was important in preventing cell death, which may cause organ damage. Our study provides new insights into the complex pathogenesis unique to COVID-19 and relevant to the development of effective therapies.