SchistoDB: an updated genome resource for the three key schistosomes of humans.
SchistoDB: an updated genome resource for the three key schistosomes of humans.
复制标题
SchistoDB：人类三种关键血吸虫的更新基因组资源。
DOI：
10.1093/nar/gks1087
复制
发表时间：
2013
影响因子：
14.9
通讯作者：
Oliveira,Guilherme
中科院分区：
文献类型：
--
作者：
Zerlotini,Adhemar;Aguiar,EricRGR;Yu,Fudong;Xu,Huayong;Li,Yixue;Young,NeilD;Gasser,RobinB;Protasio,AnnaV;Berriman,Matthew;Roos,DavidS;Kissinger,JessicaC;Oliveira,Guilherme
新发布的SchistoDB（SchistoDB.net）提供了主要血吸虫（血吸虫属）基因组数据的丰富资源，血吸虫在全世界造成数亿人患病。SchistoDB整合了该属三个物种的全基因组序列和注释，并提供了增强的生物信息学分析和数据挖掘工具。通过Strategies Web Development Kit提供的简单而全面的Web界面可用于数据的挖掘和可视化。基因组规模数据可以基于BLAST搜索、注释关键词和基因ID搜索、基因本体论术语、序列基序、蛋白质特征和系统发育关系来查询。搜索策略可以保存在用户的个人资料中以供将来检索，也可以使用唯一的网址与其他研究人员共享。
The new release of SchistoDB (http://SchistoDB.net) provides a rich resource of genomic data for key blood flukes (genusSchistosoma) which cause disease in hundreds of millions of people worldwide. SchistoDB integrates whole-genome sequence and annotation of three species of the genus and provides enhanced bioinformatics analyses and data-mining tools. A simple, yet comprehensive web interface provided through the Strategies Web Development Kit is available for the mining and visualization of the data. Genomic scale data can be queried based on BLAST searches, annotation keywords and gene ID searches, gene ontology terms, sequence motifs, protein characteristics and phylogenetic relationships. Search strategies can be saved within a user’s profile for future retrieval and may also be shared with other researchers using a unique web address.