SemanticEye: A semantic Web application to rationalize and enhance chemical electronic publishing

SemanticEye: A semantic Web application to rationalize and enhance chemical electronic publishing
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DOI:
10.1021/ci060139c
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发表时间:
2006-11-27
影响因子:
5.6
通讯作者:
Rzepa, Henry S.
Rzepa, Henry S.
中科院分区:
化学2区
文献类型:
--
作者:
Casher, Omer;Rzepa, Henry S.

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SemanticEye是一个本体及其相关工具,它改进了电子出版中化学信息的分类和开放访问。以类似于数字音乐管理的方式,编码为Adobe XMP的RDF元数据可以从各种文档格式(如PDF)中提取,并在名为Sesame的RDF存储库中进行管理。用户通过将包含XMP的电子文档“放入”WebDAV文件夹,将它们上传到中央服务器。然后可以通过文档的元数据在Web浏览器中导航文档,然后可以聚合包含相同元数据的多个文档。SemanticEye实际上不存储任何文档。通过在XMP中包含唯一标识符(如DOI),可以在解析代理的帮助下从Web检索相关文档。这种元数据驱动的方法的力量是通过包括,在XMP,InChI分子结构的标识符和发现文章之间的关系,根据他们的InChI。随着使用的日益广泛,SemanticEye将变得越来越全面。此外,遵循语义网架构可以重用开放式软件工具,为搜索引擎提供“语义直观”的替代方案,并促进对基于Web的科学信息的更大信任感。
SemanticEye, an ontology with associated tools, improves the classification and open accessibility of chemical information in electronic publishing. In a manner analogous to digital music management, RDF metadata encoded as Adobe XMP can be extracted from a variety of document formats, such as PDF, and managed in an RDF repository called Sesame. Users upload electronic documents containing XMP to a central server by "dropping" them into WebDAV folders. The documents can then be navigated in a Web browser via their metadata, and multiple documents containing identical metadata can then be aggregated. SemanticEye does not actually store any documents. By including unique identifiers within the XMP, such as the DOI, associated documents can be retrieved from the Web with the help of resolving agents. The power of this metadata driven approach is illustrated by including, within the XMP, InChI identifiers for molecular structures and finding relationships between articles based on their InChIs. SemanticEye will become increasingly more comprehensive as usage becomes more widespread. Furthermore, following the Semantic Web architecture enables the reuse of open software tools, provides a "semantically intuitive" alternative to search engines, and fosters a greater sense of trust in Web-based scientific information.