Standard reporting requirements for biological samples in metabolomics experiments: environmental context
Standard reporting requirements for biological samples in metabolomics experiments: environmental context
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DOI：
10.1007/s11306-007-0067-1
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发表时间：
2007-09-01
期刊：
影响因子：
3.6
通讯作者：
Viant, Mark R.
中科院分区：
文献类型：
--
作者：
Morrison, Norman;Bearden, Dan;Viant, Mark R.
代谢组学技术正越来越多地应用于研究从临床到环境的各种不同环境中的生物学问题。与转录组学和蛋白质组学中使用的其他高通量技术一样，代谢组学继续产生大量复杂的数据，需要进行计算管理。理解这些丰富的信息还需要访问足够详细和注释良好的元数据。在这里，我们提供了描述生物样品的标准报告要求，从环境背景下，并参与代谢组学实验。我们的意图是，这些报告要求应指导和支持环境代谢组学元数据的标准化注释、传播和解释。
Metabolomic technologies are increasingly being applied to study biological questions in a range of different settings from clinical through to environmental. As with other high-throughput technologies, such as those used in transcriptomics and proteomics, metabolomics continues to generate large volumes of complex data that necessitates computational management. Making sense of this wealth of information also requires access to sufficiently detailed and well annotated meta-data. Here we provide standard reporting requirements for describing biological samples, taken from an environmental context and involved in metabolomic experiments. It is our intention that these reporting requirements should guide and support the standardised annotation, dissemination and interpretation of environmental metabolomics metadata.