Java editor for biological pathways
Java editor for biological pathways
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DOI：
10.1093/bioinformatics/btg052
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发表时间：
2003-04-12
期刊：
影响因子：
5.8
通讯作者：
Trajanoski, Z
中科院分区：
文献类型：
--
作者：
Trost, E;Hackl, H;Trajanoski, Z
一个可视化的基于Java的工具，用于绘制和注释生物途径的开发。该工具集成了绘制具有不同属性（大小，颜色，标签）的元素，绘制不同特征（颜色，结构，宽度，箭头）的元素之间的连接，以及添加分子生物学数据库，启动子序列，基因或基因产物功能信息和参考文献的链接的可能性。它易于使用和系统独立。编辑过程的结果是图像的PNG（便携式网络图形）文件和相应链接的XML（扩展标记语言）文件。
A visual Java-based tool for drawing and annotating biological pathways was developed. This tool integrates the possibilities of charting elements with different attributes (size, color, labels), drawing connections between elements in distinct characteristics (color, structure, width, arrows), as well as adding links to molecular biology databases, promoter sequences, information on the function of the genes or gene products, and references. It is easy to use and system independent. The result of the editing process is a PNG (portable network graphics) file for the images and XML (extended markup language) file for the appropriate links.