Access and use of the GUDMAP database of genitourinary development.
Access and use of the GUDMAP database of genitourinary development.
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DOI：
10.1007/978-1-61779-851-1_17
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发表时间：
2012-01-01
期刊：
影响因子：
--
通讯作者：
Baldock, Richard
中科院分区：
文献类型：
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作者：
Davies, Jamie A;Little, Melissa H;Baldock, Richard
泌尿生殖系统发育分子图谱项目（GUDMAP）旨在记录小鼠泌尿生殖系统发育过程中跨时间和空间的基因表达，并提供各种相关的实用和教育资源。数据来自微阵列基因表达谱（来自激光解剖和facs分类的样品）和低（整片）和高（切片）分辨率的原位杂交。数据被标注为已发布的高分辨率解剖本体，并且可以使用各种搜索界面进行访问。在这里，我们将解释如何按基因或解剖位置在数据库上运行典型查询、如何查看数据、如何执行复杂查询以及如何提交数据。
The Genitourinary Development Molecular Atlas Project (GUDMAP) aims to document gene expression across time and space in the developing urogenital system of the mouse, and to provide access to a variety of relevant practical and educational resources. Data come from microarray gene expression profiling (from laser-dissected and FACS-sorted samples) and in situ hybridization at both low (whole-mount) and high (section) resolutions. Data are annotated to a published, high-resolution anatomical ontology and can be accessed using a variety of search interfaces. Here, we explain how to run typical queries on the database, by gene or anatomical location, how to view data, how to perform complex queries, and how to submit data.