REDItools: high-throughput RNA editing detection made easy

REDItools: high-throughput RNA editing detection made easy
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DOI:
10.1093/bioinformatics/btt287
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发表时间:
2013-07-15
期刊:
影响因子:
5.8
通讯作者:
Pesole, Graziano
Pesole, Graziano
中科院分区:
生物学3区
文献类型:
--
作者:
Picardi, Ernesto;Pesole, Graziano

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从大量测序数据中可靠地检测RNA编辑位点仍然具有挑战性,尽管已经提出了几种方法,但迄今为止还没有发布计算工具。在这里,我们介绍了REDItools一套Python脚本,用于使用下一代测序数据进行RNA编辑的高通量研究。
The reliable detection of RNA editing sites from massive sequencing data remains challenging and, although several methodologies have been proposed, no computational tools have been released to date. Here, we introduce REDItools a suite of python scripts to perform high-throughput investigation of RNA editing using next-generation sequencing data.