The SNP Consortium website: past, present and future
The SNP Consortium website: past, present and future
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DOI：
10.1093/nar/gkg052
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发表时间：
2003-01-01
影响因子：
14.9
通讯作者：
Stein, LD
中科院分区：
文献类型：
--
作者：
Thorisson, GA;Stein, LD
SNP Consortium网站（snp.cshl.org）自三年前最初构想以来经历了许多变化。数据库后端已经从古老的ACeDB更改为更具可扩展性的MySQL引擎。用户可以通过基因或单核苷酸多态性（SNP）关键字搜索访问数据，并浏览或转储SNP数据到文本文件。图形化的基因组浏览界面显示了在外部可用的基因预测和其他功能的背景下映射到基因组组装上的SNP。SNP等位基因频率和基因型数据可通过FTP下载和单个SNP报告网页获得。SNP连锁图谱可供下载和在比较图谱查看器中浏览。数据协调中心（DCC）网站（http：//www.example.com）的所有软件组件都是开源的。snp.cshl.org
The SNP Consortium website (http://snp.cshl.org) has undergone many changes since its initial conception three years ago. The database back end has been changed from the venerable ACeDB to the more scalable MySQL engine. Users can access the data via gene or single nucleotide polymorphism (SNP) keyword searches and browse or dump SNP data to textfiles. A graphical genome browsing interface shows SNPs mapped onto the genome assembly in the context of externally available gene predictions and other features. SNP allele frequency and genotype data are available via FTP-download and on individual SNP report web pages. SNP linkage maps are available for download and for browsing in a comparative map viewer. All software components of the data coordinating center (DCC) website (http://snp.cshl.org) are open source.