The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae).

The complete mitochondrial genome of the apple snail Pomacea maculate (Gastropoda: Ampullariidae).
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苹果蜗牛 Pomacea maculate(腹足纲:Ampullariidae)的完整线粒体基因组

DOI:
10.1080/23802359.2018.1511841
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发表时间:
2018-10-26
期刊:
Mitochondrial DNA. Part B, Resources
影响因子:
--
通讯作者:
Zhao B
Zhao B
中科院分区:
其他
文献类型:
--
作者:
Yang H;Zhang JE;Deng Z;Luo H;Guo J;Zhang C;Wu Y;Luo M;Zhao B

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本文报道了斑福寿螺的线粒体基因组全序列。线粒体基因组全长15,512 bp,包含13个蛋白质编码基因、2个rRNA基因、22个tRNA基因。轻链的核苷酸组成为:A占41.13%,T占30.81%,C占15.25%,G占12.81%。其基因排列和分布与典型的脊椎动物不同。D环的缺失与腹足类一致,但至少有一个长的非编码区是转录和复制起始的必需调控元件。基于15种新腹足类的线粒体全基因组,采用最大似然法构建系统发育树,以多角手足类为外类群,评价其系统发育关系和进化程度。研究结果为解决系统发育和遗传学问题提供了基础数据。
We present the complete mitochondrial genome of Pomacea maculate in this study. The mitochondrial genome is 15,512 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes. Overall nucleotide compositions of the light strand are 41.13% of A, 30.81% of T, 15.25% of C and 12.81% of G. Its gene arrangement and distribution are different from the typical vertebrates. The absence of D-loop is consistent with the Gastropoda, but at least one lengthy non-coding region is essential regulatory element for the initiation of transcription and replication. Phylogenetic tree is constructed by the maximum-likelihood method based on the complete mitochondrial genomes of 15 species of Caenogastropoda, using Helix aspersa as outgroup to assess their actual phylogenetic relationship and evolution. The result provides fundamental data for resolving phylogenetic and genetic problems related to effective management strategies.
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影响因子: --
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