W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis.

W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis.
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DOI:
10.1093/nar/gkw256
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发表时间:
2016-07-08
影响因子:
14.9
通讯作者:
Minh BQ
Minh BQ
中科院分区:
生物学2区
文献类型:
--
作者:
Trifinopoulos J;Nguyen LT;von Haeseler A;Minh BQ

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本文介绍了W-IQ-TREE,一个直观的和用户友好的Web界面和服务器的IQ树,一个有效的系统发育软件的最大似然分析。W-IQ-TREE支持多种序列类型(DNA、蛋白质、密码子、二进制和形态学)的常见比对格式和广泛的进化模型,包括混合和分区模型。W-IQ-TREE执行快速模型选择、分区方案查找、高效树重建、超快速自举、分支测试和树拓扑测试。所有计算都在专用计算机集群上进行,用户通过URL或电子邮件接收结果。W-IQ-TREE可在http://iqtree.cibiv.univie.ac.at上获得。它是免费的,对所有用户开放,没有登录要求。
This article presents W-IQ-TREE, an intuitive and user-friendly web interface and server for IQ-TREE, an efficient phylogenetic software for maximum likelihood analysis. W-IQ-TREE supports multiple sequence types (DNA, protein, codon, binary and morphology) in common alignment formats and a wide range of evolutionary models including mixture and partition models. W-IQ-TREE performs fast model selection, partition scheme finding, efficient tree reconstruction, ultrafast bootstrapping, branch tests, and tree topology tests. All computations are conducted on a dedicated computer cluster and the users receive the results via URL or email. W-IQ-TREE is available at http://iqtree.cibiv.univie.ac.at. It is free and open to all users and there is no login requirement.