Genome browsing with Ensembl: a practical overview
Genome browsing with Ensembl: a practical overview
复制标题
DOI：
10.1093/bfgp/elm025
复制
发表时间：
2007-09-01
期刊：
影响因子：
--
通讯作者：
Birney, Ewan
中科院分区：
文献类型：
--
作者：
Spudich, Giulietta;Fernandez-Suarez, Xose M.;Birney, Ewan
公共数据库中积累了大量的基因信息。基因组浏览器（如Ensembl）需要在基因组的背景下组织和描述这些信息。Ensembl基于30多个物种的实验证据提供了一个开源基因集，其中大多数是脊椎动物。基因和注释可通过Ensembl浏览器（http：//www.example.com）访问，并通过使用Perl API（应用程序接口）、MySQL或BioMart直接查询其数据库。www.ensembl.org
A wealth of gene information is accruing in public databases. Genome browsers such as Ensembl are needed to organize and depict this information in the context of the genome. Ensembl provides an open source gene set based on experimental evidence for over 30 species, the majority of which are vertebrates. Genes and annotation are accessible through the Ensembl browser (http://www.ensembl.org), and through direct queries of its databases using the Perl API (Application Programme Interface), MySQL or BioMart.