Mitochondrial genome of the Chinese gizzard shad Clupanodon thrissa (Clupeiformes: Clupeidae) and related phylogenetic analyses
Mitochondrial genome of the Chinese gizzard shad Clupanodon thrissa (Clupeiformes: Clupeidae) and related phylogenetic analyses
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DOI：
10.3109/19401736.2012.710219
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发表时间：
2012-12-01
影响因子：
--
通讯作者：
Chen, Tao
中科院分区：
文献类型：
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作者：
Li, Min;Zou, Keshu;Chen, Tao
测定了中国沙棘鱼（Clupanodon thrissa） Clupanodon属（Clupanodon）单种线粒体基因组序列。整个序列长度为16692 bp，包括13个蛋白质编码基因、22个tRNA基因、2个rRNA基因和2个非编码区（控制区和l链复制起点）的典型结构。除了ND6和8个tRNA基因外，其他所有基因都编码在重链上，基因的组织与大多数其他脊椎动物相似。蛋白质编码基因序列的系统发育分析表明，赤腹小蝇与小点小蝇（Konosirus punctatus）在Clupeidae科中亲缘关系最密切，而Dorosomatinae亚科不是一个单系群。
The complete mitochondrial genome sequence of the single species from the Genus Clupanodon, the Chinese gizzard shad, Clupanodon thrissa, was determined. The entire sequence is 16,692 bp in length, including the typical structure of 13 protein-coding genes, 22 transfer RNA (tRNA) genes, 2 rRNA genes, and 2 noncoding regions (control region and L-strand replication origin). With the exception of ND6 and eight tRNA genes, all other genes are encoded on the heavy strand and the organization of genes is similar to that observed in most other vertebrates. Phylogenetic analyses using the protein coding gene sequences reveal that C. thrissa is most closely related to Konosirus punctatus within the family Clupeidae and subfamily Dorosomatinae is not a monophyletic group.