NetSeed: a network-based reverse-ecology tool for calculating the metabolic interface of an organism with its environment
NetSeed: a network-based reverse-ecology tool for calculating the metabolic interface of an organism with its environment
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DOI：
10.1093/bioinformatics/btr721
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发表时间：
2012-03-01
期刊：
影响因子：
5.8
通讯作者：
Borenstein, Elhanan
中科院分区：
文献类型：
--
作者：
Carr, Rogan;Borenstein, Elhanan
NetSeed是一个Web工具和Perl模块，用于分析代谢网络的拓扑结构和计算外源获得的化合物的集合。NetSeed是基于种子检测算法，在以前的研究中开发和验证。可用性：NetSeed基于Web的工具，开放源代码Perl模块，示例和文档可以免费在线获得：http://depts.washington.edu/elbogs/NetSeed.
NetSeed is a web tool and Perl module for analyzing the topology of metabolic networks and calculating the set of exogenously acquired compounds. NetSeed is based on the seed detection algorithm, developed and validated in previous studies.Availability: The NetSeed web-based tool, open-source Perl module, examples and documentation are freely available online at: http://depts.washington.edu/elbogs/NetSeed.