Compilation of DNA sequences of Escherichia coli K12:: description of the interactive databases ECD and ECDC (version 1997)
Compilation of DNA sequences of Escherichia coli K12:: description of the interactive databases ECD and ECDC (version 1997)
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DOI：
10.1093/nar/26.1.46
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发表时间：
1998-01-01
影响因子：
14.9
通讯作者：
Wahl, R
中科院分区：
文献类型：
--
作者：
Kröger, M;Wahl, R
我们已经编译了可从GenBank和EMBL数据库获得的大肠杆菌K12的DNA序列数据，并且独立于文献。我们现在通过万维网系统（http：//susi.bio.uni-giessen.de/ecdc.html）提供ECD大肠杆菌数据库的最权威版本。我们的数据库包含了最近由两个竞争团体公布的完整的基因组序列和一组组装的所有序列。数据库的组织允许每个单独的基因或调节区域的精确物理位置，即使考虑到命名的差异。WWW程序允许用户分支到原始EMBL和SWISS-PROT序列。提供了一些到其他处理大肠杆菌的WWW下水道的链接，可以在线进行FASTA和BLAST搜索。除了WWW格式之外，还可以通过FTP获得平面文件版本。两个系统序列测定和/或文献之间的许多差异尚未得到解决，但是，我们的数据库可以作为分辨率和/或菌株差异分配的参考来源。
We have compiled the DNA sequence data for Escherichia coli K12 available from the GenBank and EMBL data libraries and independently from the literature, We provide the most definitive version of the ECD Escherichia coli database now exclusively via the World Wide Web System (http://susi.bio.uni-giessen.de/ecdc.html). Our database encloses the completed genome sequence recently published by two competing groups and an assembled set of ail elder sequences, The organisation of the database allows precise physical location of each individual gene or regulatory region, even taking into consideration discrepancies in nomenclature, The WWW program allows to the user to branch into the original EMBL and SWISS-PROT datafiles, A number of links to other WWW sewers dealing with E.coli is provided, A FASTA and BLAST search may be performed online. Besides the WWW format a flat file version may be obtained via ftp. A number of discrepancies between the two systematic sequence determinations and/or the literature have not yet been resolved, However, our database may serve as a reference source far resolution and/or the assignment of strain difference.