BacDive--The Bacterial Diversity Metadatabase in 2016.
BacDive--The Bacterial Diversity Metadatabase in 2016.
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DOI：
10.1093/nar/gkv983
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发表时间：
2016-01-04
影响因子：
14.9
通讯作者：
Overmann J
中科院分区：
文献类型：
--
作者：
Söhngen C;Podstawka A;Bunk B;Gleim D;Vetcininova A;Reimer LC;Ebeling C;Pendarovski C;Overmann J
细菌多样性元数据库(http://bacdive.dsmz.de))提供有关细菌和古生物多样性的菌株相关信息。数据范围包括分类学、形态学、生理学、采样和伴随的环境条件以及分子生物学。大多数数据都是手动注释和整理的。目前(2015年9月9日发布)，BacDive涵盖53 978个菌株。新实现的RESTful Web服务以机器可读的XML和JSON格式提供对内容的即时访问。除了数据内容的全面增加外，BacDive还提供了新的数据字段和功能，例如在高级搜索中搜索基因名称、质粒或16S rRNA，以及改进了条目与外部生命科学网络资源的链接。
BacDive–the Bacterial Diversity Metadatabase (http://bacdive.dsmz.de) provides strain-linked information about bacterial and archaeal biodiversity. The range of data encompasses taxonomy, morphology, physiology, sampling and concomitant environmental conditions as well as molecular biology. The majority of data is manually annotated and curated. Currently (with release 9/2015), BacDive covers 53 978 strains. Newly implemented RESTful web services provide instant access to the content in machine-readable XML and JSON format. Besides an overall increase of data content, BacDive offers new data fields and features, e.g. the search for gene names, plasmids or 16S rRNA in the advanced search, as well as improved linkage of entries to external life science web resources.