The proteomics standards initiative

The proteomics standards initiative
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DOI:
10.1002/pmic.200300496
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发表时间:
2003-07-01
期刊:
影响因子:
3.4
通讯作者:
Apweiler, R
Apweiler, R
中科院分区:
生物学3区
文献类型:
--
作者:
Orchard, S;Hermjakob, H;Apweiler, R

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蛋白质组学标准倡议(PSI)旨在定义蛋白质组学数据表示的社区标准,并促进数据比较,交换和验证。在质谱和蛋白质相互作用领域制定数据交换共同标准方面取得了进展。正在为新兴的美国测试和测量协会质谱标准创建一个蛋白质组学特定的扩展,该标准将得到硬件和软件制造商的支持。目前正在开发蛋白质组学实验的数据模型,并正在讨论建立一个公开的蛋白质组学数据库。蛋白质-蛋白质相互作用小组预计将很快发布蛋白质-蛋白质相互作用的1级PSI数据交换格式,并已开始讨论2级的内容。
The Proteomics Standards Initiative (PSI) aims to define community standards for data representation in proteomics and to facilitate data comparison, exchange and verification. Progress has been made in the development of common standards for data exchange in the fields of both mass spectrometry and protein-protein interaction. A proteomics-specific extension is being created for the emerging American Society for Tests and Measurements mass spectrometry standard, which will be supported by manufacturers of both hardware and software. A data model for proteomics experimentation is under development and discussions on a public repository for published proteomics data are underway. The Protein-Protein Interactions group expects to publish the Level 1 PSI data exchange format for protein-protein interactions soon and discussions as to the content of Level 2 have been initiated.