The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
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DOI:
10.1093/nar/28.1.45
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发表时间:
2000-01-01
影响因子:
14.9
通讯作者:
Apweiler, R
Apweiler, R
中科院分区:
生物学2区
文献类型:
--
作者:
Bairoch, A;Apweiler, R

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SWISS-PROT是一个精心策划的蛋白质序列数据库,致力于提供高水平的注释(如蛋白质功能的描述,其结构域结构,翻译后修饰,变体等),最低程度的冗余和与其他数据库的高度集成,数据库的最新发展包括格式和内容的增强,交叉引用其他数据库,新的文件档案和改进:TrEMBL,SWISS-PROT的计算机注释补充。TrEMBL由来自EMBL核苷酸序列数据库中所有编码序列(CDS)翻译的SWISS-PROT样格式的条目组成,除了SWISS-PROT中已经包含的CDS。我们还描述了人类蛋白质组学计划(HPI),这是一个根据SWISS-PROT的质量标准注释所有已知人类序列的主要项目,SWISS-PROT可在http://www.expasy.ch/sprot/和http://www.ebi.ac.uk/swissprot/上获得。
SWISS-PROT is a curated protein sequence database which:strives to provide a high level of annotation (such as the description of the function of a protein, its domains structure, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with other databases, Recent developments of the database include format and content enhancements, cross-references to additional databases, new documentation files and improvements:to TrEMBL, a computer-annotated supplement to SWISS-PROT. TrEMBL consists of entries in SWISS-PROT-like format derived from the translation of all coding sequences (CDSs) in the EMBL Nucleotide Sequence Database, except the CDSs already included in SWISS-PROT. We also describe the Human Proteomics Initiative (HPI), a major project to annotate all known human sequences according to the quality standards of SWISS-PROT, SWISS-PROT is available at: http://www.expasy.ch/sprot/ and http://www.ebi.ac.uk/swissprot/.