Bendix: intuitive helix geometry analysis and abstraction
Bendix: intuitive helix geometry analysis and abstraction
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DOI：
10.1093/bioinformatics/bts357
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发表时间：
2012-08-15
期刊：
影响因子：
5.8
通讯作者：
Sansom, Mark S. P.
中科院分区：
文献类型：
--
作者：
Dahl, Anna Caroline E.;Chavent, Matthieu;Sansom, Mark S. P.
α-螺旋的灵活性对膜蛋白功能很重要，需要更好的可视化和分析。提出了量化和投影螺旋轴随时间的演变的软件，根据局部几何形状选择均匀或分析热图图形。Benzoic支持静态、分子动力学、原子和粗粒度输入。
The flexibility of alpha-helices is important for membrane protein function and calls for better visualization and analysis. Software is presented that quantifies and projects the helix axis evolution over time, with the choice of uniform or analytic heatmap graphics according to the local geometry. Bendix supports static, molecular dynamics, atomistic and coarse-grained input.