Plant cis-acting regulatory DNA elements (PLACE) database: 1999
Plant cis-acting regulatory DNA elements (PLACE) database: 1999
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DOI：
10.1093/nar/27.1.297
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发表时间：
1999-01-01
影响因子：
14.9
通讯作者：
Korenaga, T
中科院分区：
文献类型：
--
作者：
Higo, K;Ugawa, Y;Korenaga, T
PLACE (http://www.dna.affrc.go.jp/htdocs/PLACE/) 是植物顺式作用调控 DNA 元件中发现的核苷酸序列基序的数据库。基序是从先前发表的有关维管植物基因的报告中提取的。除了最初报道的基序之外，在后来的报道中还汇编了它们在其他基因或其他植物物种中的变异。 PLACE 数据库中每个主题的文档除了包含主题序列外，还包含每个主题的简要定义和描述，以及带有 PubMed ID 号和 GenBank 登录号（如果有）的相关文献。用户可以使用我们网站上的信号扫描程序搜索其查询序列中的顺式元素。结果将以三种形式之一报告。单击结果报告中的 PLACE 登录号将打开相关主题文档。单击文档中的 PubMed 或 Gen Bank 登录号将允许用户访问这些数据库，并阅读文献摘要或 DNA 数据库中的注释。本报告总结了该数据库和可用工具的现状。
PLACE (http://www.dna.affrc.go.jp/htdocs/PLACE/) is a database of nucleotide sequence motifs found in plant cis-acting regulatory DNA elements. Motifs were extracted from previously published reports on genes in vascular plants. In addition to the motifs originally reported, their variations in other genes or in other plant species in later reports are also compiled. Documents for each motif in the PLACE database contains, in addition to a motif sequence, a brief definition and description of each motif, and relevant literature with PubMed ID numbers and GenBank accession numbers where available. Users can search their query sequences for cis-elements using the Signal Scan prog ram at our web site. The results will be reported in one of the three forms. Clicking the PLACE accession numbers in the result report will open the pertinent motif document. Clicking the PubMed or Gen Bank accession number in the document will allow users to access to these databases, and to read the abstract of the literature or the annotation in the DNA database. This report summarizes the present status of this database and available tools.