The EBI SRS server - recent developments
The EBI SRS server - recent developments
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DOI：
10.1093/bioinformatics/18.2.368
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发表时间：
2002-02-01
期刊：
影响因子：
5.8
通讯作者：
Etzold, T
中科院分区：
文献类型：
--
作者：
Zdobnov, EM;Lopez, R;Etzold, T
动机：如果没有先进的数据管理系统，当前的数据爆炸是棘手的。当众多的数据集在一个统一的接口下相互连接时，它们就变得非常有用，代表了领域知识。SRS已成为一个集成系统，用于数据检索和数据分析应用程序。它提供了通过共享属性搜索多个数据库和快速有效地跨数据库查询的能力。结果：在这里，我们介绍了EBI SRS服务器（http：//www.example.com）的最新发展。srs.ebi.ac.uk EBI SRS服务器目前包含130多个生物数据库，并集成了10多个应用程序。它是分子生物学数据的中心资源，也是数据集成最新发展的参考服务器。EBI SRS服务器最新增加的内容之一是InterPro数据库-蛋白质结构域和功能位点的集成资源。它以XML格式分发，成为低级别XML-SRS集成的转折点。我们提出InterProScan作为数据分析应用程序的一个例子，描述SRS 6的一些先进的功能，并介绍SRSQuickSearch JavaScript接口SRS。
Motivation: The current data explosion is intractable without advanced data management systems. The numerous data sets become really useful when they are interconnected under a uniform interface-representing the domain knowledge. The SRS has become an integration system for both data retrieval and applications for data analysis. It provides capabilities to search multiple databases by shared attributes and to query across databases fast and efficiently.Results: Here we present recent developments at the EBI SRS server (http://srs.ebi.ac.uk). The EBI SRS server contains today more than 130 biological databases and integrates more than 10 applications. It is a central resource for molecular biology data as well as a reference server for the latest developments in data integration. One of the latest additions to the EBI SRS server is the InterPro database-Integrated Resource of Protein Domains and Functional Sites. Distributed in XML format it became a turning point in low level XML-SRS integration. We present InterProScan as an example of data analysis applications, describe some advanced features of SRS6, and introduce the SRSQuickSearch JavaScript interfaces to SRS.