GENCLONE: a computer program to analyse genotypic data, test for clonality and describe spatial clonal organization
GENCLONE: a computer program to analyse genotypic data, test for clonality and describe spatial clonal organization
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DOI：
10.1111/j.1471-8286.2006.01522.x
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发表时间：
2007-01-01
期刊：
影响因子：
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通讯作者：
Belkhir, Khalid
中科院分区：
文献类型：
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作者：
Arnaud-Haond, Sophie;Belkhir, Khalid
GENCLONE 1.0是一款利用单倍体或二倍体生物分子标记的基因型数据研究克隆性及其空间成分的软件。GENCLONE 1.0执行以下任务。(i)区分不同的多位点基因型（mlg），并使用置换和重采样方法来测试用于估计基因型和遗传多样性的位点集和采样单元的可靠性（该程序也适用于非克隆生物）；（ii）计算统计数据以测试克隆繁殖或复制的克隆同一性；（iii）计算描述基因型多样性的各种指数；（iv）利用自适应空间自相关方法和克隆子范围估计方法总结了mlg的空间组织。
GENCLONE 1.0 is designed for studying clonality and its spatial components using genotype data with molecular markers from haploid or diploid organisms. GENCLONE 1.0 performs the following tasks. (i) discriminates distinct multilocus genotypes (MLGs), and uses permutation and resampling approaches to test for the reliability of sets of loci and sampling units for estimating genotypic and genetic diversity (a procedure also useful for nonclonal organisms); (ii) computes statistics to test for clonal propagation or clonal identity of replicates; (iii) computes various indices describing genotypic diversity; and (iv) summarizes the spatial organization of MLGs with adapted spatial autocorrelation methods and clonal subrange estimates.