Integrating and annotating the interactome using the MiMI plugin for cytoscape
Integrating and annotating the interactome using the MiMI plugin for cytoscape
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DOI：
10.1093/bioinformatics/btn501
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发表时间：
2009-01-01
期刊：
影响因子：
5.8
通讯作者：
States, David J.
中科院分区：
文献类型：
--
作者：
Gao, Jing;Ade, Alex S.;States, David J.
MiMI分子相互作用知识库整合了来自多个数据源的数据，将相互作用解析为标准基因名称和符号，链接到来自基因本体论（GO）、医学主题词表（MeSH）和PubMed的注释数据，并规范相互作用类型的描述。在此，我们描述了一个Cytoscape插件，它从MiMI获取相互作用和注释数据，并链接到多个数据源和工具。该插件支持对相互作用组进行社区注释。
The MiMI molecular interaction repository integrates data from multiple sources, resolves interactions to standard gene names and symbols, links to annotation data from GO, MeSH and PubMed and normalizes the descriptions of interaction type. Here, we describe a Cytoscape plugin that retrieves interaction and annotation data from MiMI and links out to multiple data sources and tools. Community annotation of the interactome is supported.