Kmer-db: instant evolutionary distance estimation

Kmer-db: instant evolutionary distance estimation
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DOI:
10.1093/bioinformatics/bty610
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发表时间:
2019-01-01
期刊:
影响因子:
5.8
通讯作者:
Danek, Agnieszka
Danek, Agnieszka
中科院分区:
生物学3区
文献类型:
--
作者:
Deorowicz, Sebastian;Gudys, Adam;Danek, Agnieszka

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Kmer - db是一种基于从基因组或测序读段中提取的k - mers来评估进化关系的新工具。由于高效的数据结构和并行实现,我们的软件能够评估40715种病原体之间的距离(句子不完整,最后一个“in”后面应该还有内容)
Kmer-db is a new tool for estimating evolutionary relationship on the basis of k-mers extracted from genomes or sequencing reads. Thanks to an efficient data structure and parallel implementation, our software estimates distances between 40 715 pathogens in