Kmer-db: instant evolutionary distance estimation
Kmer-db: instant evolutionary distance estimation
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DOI:
10.1093/bioinformatics/bty610
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发表时间:
2019-01-01
期刊:
影响因子:
5.8
通讯作者:
Danek, Agnieszka
中科院分区:
文献类型:
--
作者:
Deorowicz, Sebastian;Gudys, Adam;Danek, Agnieszka
Kmer-db is a new tool for estimating evolutionary relationship on the basis of k-mers extracted from genomes or sequencing reads. Thanks to an efficient data structure and parallel implementation, our software estimates distances between 40 715 pathogens in