STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method
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DOI:
10.1007/s12686-011-9548-7
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发表时间:
2012-06-01
影响因子:
1.1
通讯作者:
vonHoldt, Bridgett M.
vonHoldt, Bridgett M.
中科院分区:
环境科学与生态学4区
文献类型:
--
作者:
Earl, Dent A.;vonHoldt, Bridgett M.

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我们介绍了结构收割器(可在http://taylor0.biology.ucla.edu/structureHarvester/),获得,这是一个基于Web的程序,用于整理程序结构生成的结果。该程序提供了一种快速的方法来评估和可视化多个K值和数百次迭代的似然值,以便更容易地检测最适合数据的遗传组的数量。此外,结构收割机将重新格式化数据,以用于下游程序,如CLUMPP。
We present STRUCTURE HARVESTER (available at http://taylor0.biology.ucla.edu/structureHarvester/), a web-based program for collating results generated by the program STRUCTURE. The program provides a fast way to assess and visualize likelihood values across multiple values of K and hundreds of iterations for easier detection of the number of genetic groups that best fit the data. In addition, STRUCTURE HARVESTER will reformat data for use in downstream programs, such as CLUMPP.