Volumetric neuroimage analysis extensions for the MIPAV software package

Volumetric neuroimage analysis extensions for the MIPAV software package
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DOI:
10.1016/j.jneumeth.2007.05.024
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发表时间:
2007-09-15
影响因子:
3
通讯作者:
Pham, Dzung L.
Pham, Dzung L.
中科院分区:
医学4区
文献类型:
--
作者:
Bazin, Pierre-Louis;Cuzzocreo, Jennifer L.;Pham, Dzung L.

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我们描述了一个新的收集公开可用的软件工具进行定量神经影像分析。该工具在用户友好的图形环境中执行半自动的降雨提取、组织分类、Talairach对齐和基于地图集的测量。它们被实现为MIPAV的插件,MIPAV是美国国立卫生研究院提供的免费医学图像处理软件包。由于插件和MIPAV都是用Java实现的,因此几乎可以在任何操作系统平台上使用。除了软件插件之外,我们还发布了Talairach地图集的数字版本,可用于执行区域体积分析。将新工具应用于模拟和真实的神经成像数据集进行了几项研究。(c)2007 Elsevier B.V.保留所有权利。
We describe a new collection of publicly available software tools for performing quantitative neuroimage analysis. The tools perform semiautomaticrain extraction, tissue classification, Talairach alignment, and atlas-based measurements within a user-friendly graphical environment. They are implemented as plug-ins for MIPAV, a freely available medical image processing software package from the National Institutes of Health. Because the plug-ins and MIPAV are implemented in Java, both can be utilized on nearly any operating system platform. In addition to the software plug-ins. we have also released a digital version of the Talairach atlas that can be used to perform regional volumetric analyses. Several studies are conducted applying the new tools to simulated and real neuroimaging data sets. (c) 2007 Elsevier B.V. All rights reserved.