The MoSGrid Science Gateway - A Complete Solution for Molecular Simulations.

The MoSGrid Science Gateway - A Complete Solution for Molecular Simulations.
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MoSGrid Science Gateway - 分子模拟的完整解决方案。

DOI:
10.1021/ct500159h
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发表时间:
2014
影响因子:
5.5
通讯作者:
S. Herres‐Pawlis
S. Herres‐Pawlis
中科院分区:
化学1区
文献类型:
--
作者:
Jens Krüger;Richard Grunzke;S. Gesing;Sebastian Breuers;A. Brinkmann;Luis de la Garza;O. Kohlbacher;Martin Kruse;W. Nagel;Lars Packschies;R. Müller;Patrick Schäfer;Charlotta P. I. Schärfe;T. Steinke;Tobias Schlemmer;K. Warzecha;A. Zink;S. Herres‐Pawlis

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MoSGrid门户网站为具有各种背景和经验水平的科学家提供了一种在分布式计算基础设施上进行高质量分子模拟的方法。用户友好的Web界面保证了在该领域建立的现代化学模拟应用程序的易用性。使用定义良好的工作流程注释的元数据在很大程度上提高了良好实验室实践意义上的模拟的再现性。MoSGrid科学网关支持量子化学(QC)、分子动力学(MD)和对接领域的应用。本文介绍了开源的MoSGrid架构,以及从其设计中吸取的经验教训。
The MoSGrid portal offers an approach to carry out high-quality molecular simulations on distributed compute infrastructures to scientists with all kinds of background and experience levels. A user-friendly Web interface guarantees the ease-of-use of modern chemical simulation applications well established in the field. The usage of well-defined workflows annotated with metadata largely improves the reproducibility of simulations in the sense of good lab practice. The MoSGrid science gateway supports applications in the domains quantum chemistry (QC), molecular dynamics (MD), and docking. This paper presents the open-source MoSGrid architecture as well as lessons learned from its design.
DOI: 10.1016/s0065-3233(03)66002-x
发表时间: 2003
影响因子: --
作者:
J. Ponder;D. Case
通讯作者: J. Ponder;D. Case