Fluorescence resonance energy transfer studies of aminoglycoside binding to a T box antiterminator RNA

Fluorescence resonance energy transfer studies of aminoglycoside binding to a T box antiterminator RNA
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DOI:
10.1016/j.bmcl.2005.02.007
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发表时间:
2005-04-15
影响因子:
2.7
通讯作者:
Hines, JV
Hines, JV
中科院分区:
医学4区
文献类型:
--
作者:
Means, JA;Hines, JV

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The T box transcription antitermination mechanism is found in many Gram-positive bacteria. The T box genes are typically tRNA synthetase, amino acid biosynthesis, and amino acid transport genes that have a common transcriptional control mechanism in which a unique RNA-RNA interaction occurs between an uncharged tRNA and the 5 ' leader region of the nascent mRNA, leading to antitermination of transcription. The tRNA binds the mRNA in at least two regions: the specifier sequence and the antiterminator. If the latter interaction does not occur, then transcription is terminated. The binding of eight different aminoglycosides to a model of the Bacillus subtilis tyrS T box antiterminator RNA has been studied using fluorescence resonance energy transfer. The observed single-site binding dissociation constants were in the low to mid micromolar range. The structure-activity relationship of aminoglycoside binding indicates that selective binding of small molecules to T box antiterminator RNA can be achieved. (c) 2005 Elsevier Ltd. All rights reserved.