Visualizing next-generation sequencing data with JBrowse
Visualizing next-generation sequencing data with JBrowse
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DOI：
10.1093/bib/bbr078
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发表时间：
2013-03-01
影响因子：
9.5
通讯作者：
Holmes, Ian
中科院分区：
文献类型：
--
作者：
Westesson, Oscar;Skinner, Mitchell;Holmes, Ian
JBrowse 是一个基于网络的基因组浏览器，允许在一个连贯的视觉框架中可视化、解释和导航许多数据源。 JBrowse 使用高效的数据结构、预生成图像图块和客户端渲染来提供快速、交互式的浏览体验。 JBrowse 的许多设计功能使其非常适合可视化大容量数据，例如对齐的下一代测序读数。
JBrowse is a web-based genome browser, allowing many sources of data to be visualized, interpreted and navigated in a coherent visual framework. JBrowse uses efficient data structures, pre-generation of image tiles and client-side rendering to provide a fast, interactive browsing experience. Many of JBrowse's design features make it well suited for visualizing high-volume data, such as aligned next-generation sequencing reads.