Benefits of machine learning and sampling frequency on phytoplankton bloom forecasts in coastal areas
Benefits of machine learning and sampling frequency on phytoplankton bloom forecasts in coastal areas
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DOI：
10.1016/j.ecoinf.2020.101174
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发表时间：
2020-11-01
影响因子：
5.1
通讯作者：
Schmitt, Francois G.
中科院分区：
文献类型：
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作者：
Derot, Jonathan;Yajima, Hiroshi;Schmitt, Francois G.
在水生生态系统中，人类活动破坏了营养物质的流动，从而促进了有害藻类大量繁殖，可能直接影响经济和人类健康。在此框架内，预测叶绿素a在沿海地区的代理是管理这些藻华的第一步。主要目标是通过使用机器学习模型分析浮游植物水华预测如何受到不同采样频率的影响。本研究中使用的数据库来自位于英吉利海峡的自动化系统。该设备的采样频率为20分钟。我们认为，在六年的时间内，12个理化参数。我们的预测方法是基于随机森林（RF）模型和滑动窗口策略。这些滑动窗口的滞后时间从12小时到3个月不等，有四个不同的采样时间，直到1d.Results结果表明，最佳的预测得到了20分钟的时间步长，平均R-2为0.62。此外，当水温约为11.8 ℃时，预测荧光的最高值。因此，我们证明了采样频率直接影响RF模型的预测性能。此外，这种模型可以重建与生物过程非常相似的相互作用。我们的研究表明，RF模型可以利用高频数据集中包含的额外信息。这里提出的方法奠定了基础，为数字决策工具，可以帮助减轻这些藻华的影响的发展。
In aquatic ecosystems, anthropogenic activities disrupt nutrient fluxes, thereby promoting harmful algal blooms that could directly impact economies and human health. Within this framework, the forecasting of the proxy of chlorophyll a in coastal areas is the first step to managing these algal blooms. The primary goal was to analyze how phytoplankton bloom forecasts are impacted by different sampling frequencies, by using a machine learning model. The database used in this study was sourced from an automated system located in the English Channel. This device has a sampling frequency of 20 min. We considered 12 physicochemical parameters over a six-year period. Our forecast methodology is based on the random forest (RF) model and a sliding window strategy. The lag times for these sliding windows ranged from 12 h to 3 months with four different sampling times until 1 day.The results indicate that the optimal forecast was obtained for a 20 min time step, with an average R-2 of 0.62. Moreover, the highest values of fluorescence were predicted when the water temperature was approximately 11.8 degrees C. Consequently, we demonstrated that the sampling frequency directly impacts the forecast performance of an RF model. Furthermore, this kind of model can recreate interactions that closely resemble biological processes. Our study suggests that the RF model can utilize the additional information contained in high-frequency datasets. The methodology presented here lays the foundation for the development of a numerical decision-making tool that could help mitigate the impact of these algal blooms.