Skull Segmentation from CBCT Images via Voxel-Based Rendering.

Skull Segmentation from CBCT Images via Voxel-Based Rendering.
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基于体素绘制的CBCT图像颅骨分割。

DOI:
10.1007/978-3-030-87589-3_63
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发表时间:
2021-09
期刊:
Machine learning in medical imaging. MLMI (Workshop)
影响因子:
--
通讯作者:
Xia JJ
Xia JJ
中科院分区:
其他
文献类型:
--
作者:
Liu Q;Lian C;Xiao D;Ma L;Deng H;Chen X;Shen D;Yap PT;Xia JJ

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三维锥形束CT图像的颅骨分割对于颅颌面畸形的诊断和治疗具有重要意义。基于卷积神经网络(CNN)的方法目前在体积图像分割中占主导地位,但是这些方法受到有限的GPU存储器和大的图像尺寸(例如,512 × 512 × 448)。典型的临时策略(例如下采样或补丁裁剪)会由于对局部细节或全局上下文信息的捕获不足而降低分割准确性。其他方法如全局-局部网络(GLNet)专注于神经网络的改进,旨在以GPU内存高效的方式将局部细节和全局上下文信息联合收割机结合起来。然而,所有这些方法都是在规则网格上操作的,这对于体积图像分割来说是计算效率低下的。在这项工作中,我们提出了一种新的基于体素Rend的网络(VR-U-Net),通过将3D U-Net的内存效率变体与基于体素的渲染(VoxelRend)模块相结合,该模块通过基于体素的预测在非规则网格上细化局部细节。建立在相对粗糙的特征图上,VoxelRend模块以GPU内存消耗的一小部分实现了分割精度的显着提高。我们在从当地医院收集的高分辨率CBCT数据集上评估了我们提出的VR-U-Net颅骨分割任务。实验结果表明,VR-U-Net算法在节省内存的情况下获得了高质量的分割结果,具有较好的实用价值。
Skull segmentation from three-dimensional (3D) cone-beam computed tomography (CBCT) images is critical for the diagnosis and treatment planning of the patients with craniomaxillofacial (CMF) deformities. Convolutional neural network (CNN)-based methods are currently dominating volumetric image segmentation, but these methods suffer from the limited GPU memory and the large image size (e.g., 512 × 512 × 448). Typical ad-hoc strategies, such as down-sampling or patch cropping, will degrade segmentation accuracy due to insufficient capturing of local fine details or global contextual information. Other methods such as Global-Local Networks (GLNet) are focusing on the improvement of neural networks, aiming to combine the local details and the global contextual information in a GPU memory-efficient manner. However, all these methods are operating on regular grids, which are computationally inefficient for volumetric image segmentation. In this work, we propose a novel VoxelRend-based network (VR-U-Net) by combining a memory-efficient variant of 3D U-Net with a voxel-based rendering (VoxelRend) module that refines local details via voxel-based predictions on non-regular grids. Establishing on relatively coarse feature maps, the VoxelRend module achieves significant improvement of segmentation accuracy with a fraction of GPU memory consumption. We evaluate our proposed VR-U-Net in the skull segmentation task on a high-resolution CBCT dataset collected from local hospitals. Experimental results show that the proposed VR-U-Net yields high-quality segmentation results in a memory-efficient manner, highlighting the practical value of our method.
DOI: 10.1118/1.4868455
发表时间: 2014-04-01
期刊: MEDICAL PHYSICS
影响因子: 3.8
作者:
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DOI: 10.1016/j.ijom.2015.06.006
发表时间: 2015-12
影响因子: 2.4
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