Decoys 'R' Us: A database of incorrect conformations to improve protein structure prediction

Decoys 'R' Us: A database of incorrect conformations to improve protein structure prediction
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DOI:
10.1110/ps.9.7.1399
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发表时间:
2000-07-01
期刊:
影响因子:
8
通讯作者:
Levitt, M
Levitt, M
中科院分区:
生物学3区
文献类型:
--
作者:
Samudrala, R;Levitt, M

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通过在一组计算机生成的构象(诱饵)上测试该函数,以确定它是否可以容易地区分天然样构象与非天然构象,从而大大增强了用于蛋白质结构预测的能量或评分函数的开发。我们已经创建了“诱饵R”Us,一个包含许多这样的构象集的数据库,以提供一个资源,允许评分功能得到改善。
The development of an energy or scoring function for protein structure prediction is greatly enhanced by testing the function on a set of computer-generated conformations (decoys) to determine whether it can readily distinguish native-like conformations from nonnative ones. We have created "Decoys 'R' Us," a database containing many such sets of conformations, to provide a resource that allows scoring functions to be improved.