GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research
GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research
复制标题
DOI：
10.1111/j.1471-8286.2005.01155.x
复制
发表时间：
2006-03-01
期刊：
影响因子：
--
通讯作者：
Smouse, PE
中科院分区：
文献类型：
--
作者：
Peakall, R;Smouse, PE
GENALEX是一个用户友好的跨平台软件包，在Microsoft Excel中运行，可以对共显性、单倍体和二进制数据进行群体遗传分析。基于等位基因频率的分析包括杂合性、F统计、Nei遗传距离、群体分配、同一性概率和成对相关性。基于距离的计算包括AMOVA、主坐标分析（PCA）、Mantel检验、多变量和2D空间自相关以及TWOGENER。超过20种不同的图表总结数据和帮助探索。序列和基因型数据可以从自动测序仪导入，并导出到其他软件。GENALEX 6最初是作为教学工具设计的，现在也为研究人员提供了功能。文档和程序可在http://www.anu.edu.au/BoZo/GenAlEx/上获得
GENALEX is a user-friendly cross-platform package that runs within Microsoft Excel, enabling population genetic analyses of codominant, haploid and binary data. Allele frequency-based analyses include heterozygosity, F statistics, Nei's genetic distance, population assignment, probabilities of identity and pairwise relatedness. Distance-based calculations include AMOVA, principal coordinates analysis (PCA), Mantel tests, multivariate and 2D spatial autocorrelation and TWOGENER. More than 20 different graphs summarize data and aid exploration. Sequence and genotype data can be imported from automated sequencers, and exported to other software. Initially designed as tool for teaching, GENALEX 6 now offers features for researchers as well. Documentation and the program are available at http://www.anu.edu.au/BoZo/GenAlEx/