Hybrid hierarchical clustering with applications to microarray data

Hybrid hierarchical clustering with applications to microarray data
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DOI:
10.1093/biostatistics/kxj007
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发表时间:
2006-04-01
期刊:
影响因子:
2.1
通讯作者:
Tibshirani, R
Tibshirani, R
中科院分区:
数学2区
文献类型:
--
作者:
Chipman, H;Tibshirani, R

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在本文中,我们提出了一种混合聚类方法,结合了自底向上的层次聚类和自顶向下的聚类的优势。第一种方法擅长识别小集群,但不擅长识别大集群;第二种方法的优势正好相反。混合方法建立在相互聚类的新思想上:一组点彼此之间比任何其他点都更接近。相互集群和自下而上的聚类方法之间的理论联系的建立,帮助他们的解释,并提供一个算法识别的相互集群。我们说明了模拟和真实的微阵列数据集的技术。
In this paper, we propose a hybrid clustering method that combines the strengths of bottom-up hierarchical clustering with that of top-down clustering. The first method is good at identifying small clusters but not large ones; the strengths are reversed for the second method. The hybrid method is built on the new idea of a mutual cluster: a group of points closer to each other than to any other points. Theoretical connections between mutual clusters and bottom-up clustering methods are established, aiding in their interpretation and providing an algorithm for identification of mutual clusters. We illustrate the technique on simulated and real microarray datasets.