FLAGdb++:: a database for the functional analysis of the Arabidopsis genome
FLAGdb++:: a database for the functional analysis of the Arabidopsis genome
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DOI：
10.1093/nar/gkh134
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发表时间：
2004-01-01
影响因子：
14.9
通讯作者：
Aubourg, S
中科院分区：
文献类型：
--
作者：
Samson, F;Brunaud, V;Aubourg, S
FLAGdb（++）致力于数据的整合和可视化，用于全测序基因组的高通量功能分析，如拟南芥所示。FLAGdb（++）以依赖于位置的方式显示预测或实验数据，并显示不同特征之间的相关性和关系。FLAGdb（++）提供了一个给定的基因组区域，总结了实验材料的特征，如探针长度，位置和特异性，这些特征会影响我们对实验结果的信心。可用信息的选定子集被链接到一个易于解释和记忆的图形显示上表示的轨迹。数据在集成到FLAGdb（++）之前进行管理、处理和格式化。FLAGdb（++）包含不同的选项，用于在会话开始时选择的许多位点之间轻松来回导航。它包括一个原始的两个组件的数据可视化，全基因组和局部视图，这是永久链接和显示互补信息。沿着染色体的沿着密度曲线可以并行显示，以提示不同结构和功能数据之间的相关性。FLAGdb（++）可以在http://genoplante-info.infobiogen.fr/FLAGdb/上完全访问。
FLAGdb(++) is dedicated to the integration and visualization of data for high-throughput functional analysis of a fully sequenced genome, as-illustrated for Arabidopsis. FLAGdb(++) displays the predicted or experimental data in a position-dependent way and displays correlations and relationships between different features. FLAGdb(++) provides for a given genome region, summarized characteristics of experimental materials like probe lengths, locations and specificities having an impact upon the confidence we will put in the experimental results. A selected subset of the available information is linked to a locus represented on an easy-to-interpret and memorable graphical display. Data are curated, processed and formatted before their integration into FLAGdb(++). FLAGdb(++) contains different options for easy back and forth navigation through many loci selected at the start of a session. It includes an original two-component visualization of the data, a genome-wide and a local view, which are permanently linked and display complementary information. Density curves along the chromosomes may be displayed in parallel for suggesting correlations between different structural and functional data. FLAGdb(++) is fully accessible at http://genoplante-info.infobiogen.fr/FLAGdb/.