Exploring FlyBase Data Using QuickSearch
Exploring FlyBase Data Using QuickSearch
复制标题
DOI：
10.1002/cpz1.731
复制
发表时间：
2023-04-01
期刊：
影响因子：
--
通讯作者：
Marygold，Steven J.
中科院分区：
文献类型：
--
作者：
Marygold，Steven J.
FlyBase(www.flybase.org)是关于黑腹果蝇遗传、基因组和功能信息的主要在线数据库。果蝇研究的悠久而丰富的历史，加上最近基因组规模和高通量技术的激增，意味着FlyBase现在存储了大量数据。研究人员需要能够快速、直观地查询这些数据，而QuickSearch工具就是为满足这些需求而设计的。该工具位于FlyBase主页上，非常方便，它被组织成一系列简单的选项卡式界面，涵盖了数据库中的主要数据和注释类。本文描述了QuickSearch工具的所有方面的功能。有了这些知识，FlyBase用户将能够充分利用所有QuickSearch功能，从而更好地获取与他们的研究相关的数据。©2023作者。基本协议1：使用QuickSearchBasic协议2：使用QuickSearchBasic协议3：使用QuickSearchBasic协议3：使用QuickSearchBasic协议4：使用QuickSearchBasic协议5：使用QuickSearchBasic协议6：使用QuickSearchBasic协议7：使用QuickSearchBasic协议8：使用QuickSearchBasic协议8：使用QuickSearchBasic协议9：使用QuickSearchBasic协议10的“GAL4等”选项卡：使用QuickSearchBasic协议的“Go”选项卡“QuickSearch基本协议11的标签：使用QuickSearchBasic协议12的”人类疾病“标签：使用QuickSearchSupport协议1的”Homologs“标签：管理FlyBase点击列表
FlyBase (www.flybase.org) is the primary online database of genetic, genomic, and functional information aboutDrosophila melanogaster. The long and rich history ofDrosophilaresearch, combined with recent surges in genomic‐scale and high‐throughput technologies, means that FlyBase now houses a huge quantity of data. Researchers need to be able to query these data rapidly and intuitively, and the QuickSearch tool has been designed to meet these needs. This tool is conveniently located on the FlyBase homepage and is organized into a series of simple tabbed interfaces that cover the major data and annotation classes within the database. This article describes the functionality of all aspects of the QuickSearch tool. With this knowledge, FlyBase users will be equipped to take full advantage of all QuickSearch features and thereby gain improved access to data relevant to their research. © 2023 The Authors. Current Protocols published by Wiley Periodicals LLC.Basic Protocol 1: Using the “Search FlyBase” tab of QuickSearchBasic Protocol 2: Using the “Data Class” tab of QuickSearchBasic Protocol 3: Using the “References” tab of QuickSearchBasic Protocol 4: Using the “Gene Groups” tab of QuickSearchBasic Protocol 5: Using the “Pathways” tab of QuickSearchBasic Protocol 6: Using the “GO” tab of QuickSearchBasic Protocol 7: Using the “Protein Domains” tab of QuickSearchBasic Protocol 8: Using the “Expression” tab of QuickSearchBasic Protocol 9: Using the “GAL4 etc” tab of QuickSearchBasic Protocol 10: Using the “Phenotype” tab of QuickSearchBasic Protocol 11: Using the “Human Disease” tab of QuickSearchBasic Protocol 12: Using the “Homologs” tab of QuickSearchSupport Protocol 1: Managing FlyBase hit lists