Network analysis of GWAS data.

Network analysis of GWAS data.
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DOI:
10.1016/j.gde.2013.09.003
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发表时间:
2013-12
影响因子:
4
通讯作者:
Raphael, Benjamin J.
Raphael, Benjamin J.
中科院分区:
生物学2区
文献类型:
--
作者:
Leiserson, Mark D. M.;Eldridge, Jonathan V.;Ramachandran, Sohini;Raphael, Benjamin J.

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全基因组关联研究(GWAS)确定了将对照群体与具有特定性状的群体区分开来的遗传变异。GWAS面临的两个挑战是:(1)识别与该性状相关的较长单倍型中的因果变异;(2)鉴定由通路内多个基因变异引起的多基因性状的因果变异。我们回顾了最近使用蛋白质-蛋白质和蛋白质- dna相互作用网络中的信息来解决这两个挑战的方法。
Genome-wide association studies (GWAS) identify genetic variants that distinguish a control population from a population with a specific trait. Two challenges in GWAS are: (1) identification of the causal variant within a longer haplotype that is associated with the trait; (2) identification of causal variants for polygenic traits that are caused by variants in multiple genes within a pathway. We review recent methods that use information in protein–protein and protein–DNA interaction networks to address these two challenges.
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