GenomePixelizer - a visualization program for comparative genomics within and between species
GenomePixelizer - a visualization program for comparative genomics within and between species
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DOI：
10.1093/bioinformatics/18.2.335
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发表时间：
2002-02-01
期刊：
影响因子：
5.8
通讯作者：
Michelmore, R
中科院分区：
文献类型：
--
作者：
Kozik, A;Kochetkova, E;Michelmore, R
GenomePixelizer 是一种可视化工具，可生成整个基因组或部分基因组中指定基因组的物理或遗传位置的自定义图像。可以同时显示多组基因并显示用户定义的特征。它允许根据序列相似性分析物种内部和物种之间的重复事件。该程序是用 Tcl/Tk 编写的，可以在任何支持 Tcl/Tk 工具包的平台上运行。 GenomePixelizer 为图像中的每个基因生成 HTML ImageMap 标签，允许链接到数据库。图像可以保存并呈现在网页上。
GenomePixelizer is a visualization tool that generates custom images of the physical or genetic positions of specified sets of genes in whole genomes or parts of genomes. Multiple sets of genes can be shown simultaneously with user-defined characteristics displayed. It allows the analysis of duplication events within and between species based on sequence similarities. The program is written in Tcl/Tk and works on any platform that supports the Tcl/Tk toolkit. GenomePixelizer generates HTML ImageMap tags for each gene in the image allowing links to databases. Images can be saved and presented on web pages.