SED-ED, a workflow editor for computational biology experiments written in SED-ML
SED-ED, a workflow editor for computational biology experiments written in SED-ML
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DOI：
10.1093/bioinformatics/bts101
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发表时间：
2012-04-15
期刊：
影响因子：
5.8
通讯作者：
Adams, Richard R.
中科院分区：
文献类型：
--
作者：
Adams, Richard R.
模拟实验描述标记语言（SED-ML）是一种将计算生物学实验用计算机可读的XML格式进行编码的新型社区数据标准。它的广泛采用将需要开发软件支持来处理SED-ML文件。在这里，我们描述一个软件工具，SED-ED，用于查看、编辑、验证和注释SEDML文档，同时保护最终用户不受底层XML表示的影响。SED-ED支持建模者谁希望创建，理解和进一步开发在SED-ML格式提供的仿真描述。
The simulation experiment description markup language ( SED-ML) is a new community data standard to encode computational biology experiments in a computer-readable XML format. Its widespread adoption will require the development of software support to work with SED-ML files. Here, we describe a software tool, SED-ED, to view, edit, validate and annotate SEDML documents while shielding end-users from the underlying XML representation. SED-ED supports modellers who wish to create, understand and further develop a simulation description provided in SED-ML format.