Pathology data integration with extensible Markup Language

Pathology data integration with extensible Markup Language
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DOI:
10.1016/j.humpath.2004.10.013
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发表时间:
2005-02-01
期刊:
影响因子:
3.3
通讯作者:
Berman, JJ
Berman, JJ
中科院分区:
医学3区
文献类型:
--
作者:
Berman, JJ

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XML(可扩展标记语言)作为数据组织工具的重要性怎么强调都不为过。通过 XML,病理学家可以用一种格式注释他们的所有数据(临床和解剖),该格式可以将每个病理报告转换为数据库,而不会影响叙述结构。本手稿的目的是为病理学家提供 XML 概述。示例将演示病理学家如何使用 XML 来注释各个数据元素并以通用格式构建报告,该格式可以与其他 XML 文件合并或使用标准 XML 工具进行查询。这篇手稿让病理学家了解 XML 如何允许病理数据与其他类型的生物医学数据链接,并减少我们对集中式专有数据库的依赖。由爱思唯尔公司出版
It is impossible to overstate the importance of XML (eXtensible Markup Language) as a data organization tool. With XML, pathologists can annotate all of their data (clinical and anatomic) in a format that can transform every pathology report into a database, without compromising narrative structure. The purpose of this manuscript is to provide an overview of XML for pathologists. Examples will demonstrate how pathologists can use XML to annotate individual data elements and to structure reports in a common format that can be merged with other XML files or queried using standard XML tools. This manuscript gives pathologists a glimpse into how XML allows pathology data to be linked to other types of biomedical data and reduces our dependence on centralized proprietary databases. Published by Elsevier Inc.