Virtual ligand screening against comparative protein structure models.

Virtual ligand screening against comparative protein structure models.
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针对比较蛋白质结构模型的虚拟配体筛选。

DOI:
10.1007/978-1-61779-465-0_8
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发表时间:
2012
期刊:
Methods in molecular biology (Clifton, N.J.)
影响因子:
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通讯作者:
Sali,Andrej
Sali,Andrej
中科院分区:
--
文献类型:
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作者:
Fan,Hao;Irwin,JohnJ;Sali,Andrej

文献摘要

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Virtual ligand screening uses computation to discover new ligands of a protein by screening one or more of its structural models against a database of potential ligands. Comparative protein structure modeling extends the applicability of virtual screening beyond the atomic structures determined by X-ray crystallography or NMR spectroscopy. Here, we describe an integrated modeling and docking protocol, combining comparative modeling by MODELLER and virtual ligand screening by DOCK.