Adding some SPICE to DAS
Adding some SPICE to DAS
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DOI：
10.1093/bioinformatics/bti1106
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发表时间：
2005-09-01
期刊：
影响因子：
5.8
通讯作者：
Hubbard, TJP
中科院分区：
文献类型：
--
作者：
Prlic, A;Down, TA;Hubbard, TJP
分布式注释系统（DAS）定义了用于交换生物注释的通信协议。它的动机是这样一个想法，即注释不应该由单个集中式数据库提供，而是分散在多个站点上。由DAS服务器执行的数据分发与由DAS客户端执行的可视化分离。最初的DAS协议被设计用于基因组序列的注释。我们已经将该协议扩展到适用于大分子结构。在这里，我们介绍了SPICE，一个新的DAS客户端，可用于可视化蛋白质序列和结构注释。可用性：www.example.com。
The distributed annotation system (DAS) defines a communication protocol used to exchange biological annotations. It is motivated by the idea that annotations should not be provided by single centralized databases but instead be spread over multiple sites. Data distribution, performed by DAS servers, is separated from visualization, which is carried out by DAS clients. The original DAS protocol was designed to serve annotation of genomic sequences. We have extended the protocol to be applicable to macromolecular structures. Here we present SPICE, a new DAS client that can be used to visualize protein sequence and structure annotations.Availability: http://www.efamily.org.uk/software/dasclients/spice/.