Extractor for ESI quadrupole TOF tandem MS data enabled for high throughput batch processing.
Extractor for ESI quadrupole TOF tandem MS data enabled for high throughput batch processing.
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DOI：
10.1186/1471-2105-5-162
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发表时间：
2004-10-26
影响因子：
3
通讯作者：
Sickmann A
中科院分区：
文献类型：
--
作者：
Boehm AM;Galvin RP;Sickmann A
基于质谱的蛋白质组学会产生大量数据，必须实时处理这些数据，以便有效地提供识别算法并轻松集成到自动化环境中。我们推出了 wiff2dta，这是一种用于转换使用 Applied Biosystem 的 QStar 和 QTrap 2000 和 4000 系列获得的 MS/MS 数据的工具。将 wiff2dta 的性能与标准工具进行比较，我们发现 wiff2dta 是从 ABI 原始文件格式提取光谱数据的最快解决方案。 wiff2dta 比标准工具至少快 10%。它还能够进行批处理，并且可以轻松集成到高吞吐量环境中。该程序可通过免费获得，也可从 Applied Biosystems 获得。 wiff2dta 提供了作为独立应用程序运行或作为集成在自动化和高吞吐量环境中的命令行工具在批处理过程中运行的可能性。它比提供的最先进的工具更有效。
Mass spectrometry based proteomics result in huge amounts of data that has to be processed in real time in order to efficiently feed identification algorithms and to easily integrate in automated environments. We present wiff2dta, a tool created to convert MS/MS data obtained using Applied Biosystem's QStar and QTrap 2000 and 4000 series. Comparing the performance of wiff2dta with the standard tools, we find wiff2dta being the fastest solution for extracting spectrum data from ABIs raw file format. wiff2dta is at least 10% faster than the standard tools. It is also capable of batch processing and can be easily integrated in high throughput environments. The program is freely available via , and is also available from Applied Biosystems. wiff2dta offers the possibility to run as stand-alone application or within a batch process as command-line tool integrated in automation and high-throughput environments. It is more efficient than the state-of-the-art tools provided.
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影响因子：
7
作者：
Ong, SE;Blagoev, B;Mann, M
通讯作者：
Mann, M
DOI：
10.1016/s1044-0305(96)00079-7
发表时间：
1996-11-01
影响因子：
3.2
作者：
Yates, JR;Eng, JK;Burlingame, AL
通讯作者：
Burlingame, AL
影响因子：
46.9
作者：
Gygi, SP;Rist, B;Aebersold, R
通讯作者：
Aebersold, R
影响因子：
2.9
作者：
Perkins, DN;Pappin, DJC;Cottrell, JS
通讯作者：
Cottrell, JS