SCOR: A Structural Classification of RNA database

SCOR: A Structural Classification of RNA database
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DOI:
10.1093/nar/30.1.392
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发表时间:
2002-01-01
影响因子:
14.9
通讯作者:
Brenner, SE
Brenner, SE
中科院分区:
生物学2区
文献类型:
--
作者:
Klosterman, PS;Tamura, M;Brenner, SE

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RNA结构分类(SCOR)数据库提供了259个核磁共振和X射线RNA结构中包含的三维基序的概述。在一种分类中,根据功能将结构分组。RNA基序,包括内部和外部环,也是按层次分类组织的。259个数据库条目包含223个内部循环和203个外部循环;52个条目由完全互补的双工组成。还包括了在较大的RNA结构中发现的特征良好的三级相互作用的分类以及例子。《战略与行动》数据库可在http://scor.lbl.gov.上查阅
The Structural Classification of RNA (SCOR) database provides a survey of the three-dimensional motifs contained in 259 NMR and X-ray RNA structures. In one classification, the structures are grouped according to function. The RNA motifs, including internal and external loops, are also organized in a hierarchical classification. The 259 database entries contain 223 internal and 203 external loops; 52 entries consist of fully complementary duplexes. A classification of the well-characterized tertiary interactions found in the larger RNA structures is also included along with examples. The SCOR database is accessible at http://scor.lbl.gov.