VisBOL: Web-Based Tools for Synthetic Biology Design Visualization
VisBOL: Web-Based Tools for Synthetic Biology Design Visualization
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DOI：
10.1021/acssynbio.5b00244
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发表时间：
2016-08-01
影响因子：
4.7
通讯作者：
Wipat, Anil
中科院分区：
文献类型：
--
作者：
McLaughlin, James Alastair;Pocock, Matthew;Wipat, Anil
VisBOL是一个基于Web的应用程序，允许渲染基因电路设计，使合成生物学家能够以SBOL视觉格式直观地传达设计。VisBOL设计可以导出为PNG和SVG图像等格式，以嵌入网页，演示文稿和出版物中。VisBOL工具能够从使用合成生物学开放语言（SBOL）2.0版指定的设计以及一系列众所周知的生物信息学格式（包括GenBank和Pigeoncad符号）自动生成可视化。VisBOL既作为用户可访问的网站提供，也作为可用于将图表嵌入其他内容和软件的开源（BSD）JavaScript库提供。
VisBOL is a Web-based application that allows the rendering of genetic circuit designs, enabling synthetic biologists to visually convey designs in SBOL visual format. VisBOL designs can be exported to formats including PNG and SVG images to be embedded in Web pages, presentations and publications. The VisBOL tool enables the automated generation of visualizations from designs specified using the Synthetic Biology Open Language (SBOL) version 2.0, as well as a range of well-known bioinformatics formats including GenBank and Pigeoncad notation. VisBOL is provided both as a user accessible Web site and as an open-source (BSD) JavaScript library that can be used to embed diagrams within other content and software.