COGENT: evaluating the consistency of gene co-expression networks
COGENT: evaluating the consistency of gene co-expression networks
复制标题
COGENT：评估基因共表达网络的一致性
DOI：
10.1101/2020.06.21.163535
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发表时间：
2020
期刊：
影响因子：
--
通讯作者：
Bozhilova L
中科院分区：
文献类型：
--
作者：
Bozhilova L
基因共表达网络可以以多种不同的方式构建，既可以使用不同的共表达测量，也可以使用应用于来自任何给定数据集的计算的共表达值的阈值。通常不清楚应该优选哪种共表达网络构建方法。COGENT提供了一套工具，旨在帮助选择网络构建方法，而无需任何外部验证数据。可用性和实施https：github.com/lbozhilova/COGENT.Supplementary信息补充信息可在Bioinformaticsonline获得。
SummaryGene co-expression networks can be constructed in multiple different ways, both in the use of different measures of co-expression, and in the thresholds applied to the calculated co-expression values, from any given dataset. It is often not clear which co-expression network construction method should be preferred. COGENT provides a set of tools designed to aid the choice of network construction method without the need for any external validation data.Availability and implementationhttps://github.com/lbozhilova/COGENT.Supplementary informationSupplementary information is available atBioinformaticsonline.
影响因子：
3
作者：
Bozhilova, Lyuba, V;Whitmore, Alan, V;Deane, Charlotte M.
通讯作者：
Deane, Charlotte M.
影响因子：
3.7
作者：
Abbas-Aghababazadeh F;Li Q;Fridley BL
通讯作者：
Fridley BL