The COMPARE Data Hubs
The COMPARE Data Hubs
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DOI：
10.1093/database/baz136
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发表时间：
2019-01-08
影响因子：
5.8
通讯作者：
Cochrane, Guy
中科院分区：
文献类型：
--
作者：
Amid, Clara;Pakseresht, Nima;Cochrane, Guy
数据共享使研究社区能够交换发现并基于其发现所产生的知识。在紧急情况下，公共和动物健康领域以及食品安全领域将受益于快速数据共享。但是，道德，监管和机构挑战以及缺乏合适的平台，这些平台为结构化格式提供数据共享的基础架构，通常会导致数据在期刊出版物中以补充材料的形式共享或最多共享数据。在这里，我们描述了一个信息学平台，其中包括用于结构化数据存储，管理和出版前的病原体测序数据及其与相关利益相关者的分析解释的工作流。
Data sharing enables research communities to exchange findings and build upon the knowledge that arises from their discoveries. Areas of public and animal health as well as food safety would benefit from rapid data sharing when it comes to emergencies. However, ethical, regulatory and institutional challenges, as well as lack of suitable platforms which provide an infrastructure for data sharing in structured formats, often lead to data not being shared or at most shared in form of supplementary materials in journal publications. Here, we describe an informatics platform that includes workflows for structured data storage, managing and pre-publication sharing of pathogen sequencing data and its analysis interpretations with relevant stakeholders.