Interrogating HIV integrase for compounds that bind--a SAMPL challenge.

Interrogating HIV integrase for compounds that bind--a SAMPL challenge.
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DOI:
10.1007/s10822-014-9721-7
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发表时间:
2014-04
影响因子:
3.5
通讯作者:
Deadman, John J.
Deadman, John J.
中科院分区:
生物学3区
文献类型:
--
作者:
Peat, Thomas S.;Dolezal, Olan;Newman, Janet;Mobley, David;Deadman, John J.

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当人们受到挑战去做一些新的或困难的事情时,往往会产生巨大的收获和新的方法。当人们相互竞争时,这一过程会得到增强--这在体育运动和科学技术(例如太空竞赛)中都可以看到。SAMPL挑战赛与CASP挑战赛一样,旨在挑战建模人员和软件开发人员开发看待分子相互作用的新方法,以便整个社区能够准确预测这些相互作用。为了实现这一挑战,必须提供数据,以便进行前瞻性测试。我们提供了与几年前针对SAMPL 4挑战的HIV整合酶进行的药物发现计划相关的未发表数据。本文介绍了用于获得这些数据的方法和所涉及的化学。
Tremendous gains and novel methods are often developed when people are challenged to do something new or difficult. This process is enhanced when people compete against each other-this can be seen in sport as well as in science and technology (e.g. the space race). The SAMPL challenges, like the CASP challenges, aim to challenge modellers and software developers to develop new ways of looking at molecular interactions so the community as a whole can progress in the accurate prediction of these interactions. In order for this challenge to occur, data must be supplied so the prospective test can be done. We have supplied unpublished data related to a drug discovery program run several years ago on HIV integrase for the SAMPL4 challenge. This paper describes the methods used to obtain these data and the chemistry involved.
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