myGrid: personalised bioinformatics on the information grid

myGrid: personalised bioinformatics on the information grid
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DOI:
10.1093/bioinformatics/btg1041
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发表时间:
2003-07-01
期刊:
影响因子:
5.8
通讯作者:
Goble, Carole A.
Goble, Carole A.
中科院分区:
生物学3区
文献类型:
--
作者:
Stevens, Robert D.;Robinson, Alan J.;Goble, Carole A.

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动机:(我的)网格项目旨在利用网格技术,重点是信息网格,并提供中间件层,使其适合生物信息学的需求。(我的)网格正在为资源发现、工作流执行和分布式查询处理等数据和应用集成构建高层服务。还提供了其他服务,以支持在工作台上发现的科学方法和最佳实践,但在工作站经常被忽视,特别是来源管理、变更通知和个性化。结果:我们概述了这些服务及其元数据。特别是,使用本体表达的语义丰富的元数据是发现、选择服务并将其组合成动态工作流所必需的。
Motivation: The (my)Grid project aims to exploit Grid technology, with an emphasis on the Information Grid, and provide middleware layers that make it appropriate for the needs of bioinformatics. (my)Grid is building high level services for data and application integration such as resource discovery, workflow enactment and distributed query processing. Additional services are provided to support the scientific method and best practice found at the bench but often neglected at the workstation, notably provenance management, change notification and personalisation.Results: We give an overview of these services and their metadata. In particular, semantically rich metadata expressed using ontologies necessary to discover, select and compose services into dynamic workflows.