Text mining meets workflow: linking U-Compare with Taverna.

Text mining meets workflow: linking U-Compare with Taverna.
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DOI:
10.1093/bioinformatics/btq464
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发表时间:
2010-10-01
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
通讯作者:
Ananiadou S
Ananiadou S
中科院分区:
其他
文献类型:
--
作者:
Kano Y;Dobson P;Nakanishi M;Tsujii J;Ananiadou S

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Summary: Text mining from the biomedical literature is of increasing importance, yet it is not easy for the bioinformatics community to create and run text mining workflows due to the lack of accessibility and interoperability of the text mining resources. The U-Compare system provides a wide range of bio text mining resources in a highly interoperable workflow environment where workflows can very easily be created, executed, evaluated and visualized without coding. We have linked U-Compare to Taverna, a generic workflow system, to expose text mining functionality to the bioinformatics community. Availability: http://u-compare.org/taverna.html, http://u-compare.org Contact: kano@is.s.u-tokyo.ac.jp Supplementary information: Supplementary data are available at Bioinformatics online.
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