BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis
BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis
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DOI：
10.1093/bioinformatics/btq539
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发表时间：
2010-11-01
期刊：
影响因子：
5.8
通讯作者：
Ane, Cecile
中科院分区：
文献类型：
--
作者：
Larget, Bret R.;Kotha, Satish K.;Ane, Cecile
动机：BUCKy 是一个实现贝叶斯一致性分析的 C++ 程序。该方法使用具有兼容树的基因的非参数聚类，并从由最大比例的基因支持的进化枝重建初级索引树。具有合并单位的分支长度的种群树是根据四重一致性因子估计的。
Motivation: BUCKy is a C++ program that implements Bayesian concordance analysis. The method uses a non-parametric clustering of genes with compatible trees, and reconstructs the primary concordance tree from clades supported by the largest proportions of genes. A population tree with branch lengths in coalescent units is estimated from quartet concordance factors.